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Sophisticated viral quasispecies with a genotype-related pattern of mutations in the hepatitis B X gene of HBeAg-ve chronically infected patients

Authors :
Marçal Yll
L. Carioti
Mercedes Guerrero-Murillo
Rosa Lopez-Martinez
Rafael Esteban-Mur
Mar Riveiro-Barciela
Cristina Godoy
Carolina González
Ariadna Rando
Josep Gregori
Selene Garcia-Garcia
Francisco Rodriguez-Frias
Maria Francesca Cortese
David Tabernero
Sara Sopena
Beatriz Pacín Ruiz
Rosario Casillas
Josep Quer
Maria Buti
Institut Català de la Salut
[Cortese MF, Casillas R, Sopena S, Yll M] Liver Unit, Liver Disease Laboratory Viral Hepatitis, Vall d’Hebron Institut de Recerca (VHIR), Barcelona, Spain. Unitat de Patologia Hepàtica, Servei de Bioquímica i Servei de Microbiologia, Vall d’Hebron Hospital Universitari, Barcelona, Spain. Universitat Autònoma de Barcelona, Bellaterra, Spain. [González C, Rando A, Lopez-Martinez R] Unitat de Patologia Hepàtica, Servei de Bioquímica i Servei de Microbiologia, Vall d’Hebron Hospital Universitari, Barcelona, Spain. Universitat Autònoma de Barcelona, Bellaterra, Spain. [Gregori J] Liver Unit, Liver Disease Laboratory Viral Hepatitis, Vall d’Hebron Institut de Recerca (VHIR), Barcelona, Spain. Roche Diagnostics SL, Sant Cugat del Vallès, Spain. [Carioti L] Department of Experimental Medicine, University of Rome Tor Vergata, Rome, Italy. [Guerrero-Murillo M] Servei de Microbiologia, Vall d’Hebron Hospital Universitari, Barcelona, Spain. [Riveiro-Barciela M, Esteban-Mur R, Buti M] Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (CIBERehd), Instituto De Salud Carlos III, Madrid, Spain. Unitat del Fetge, Servei de Medicina Interna, Vall d’Hebron Hospital Universitari, Barcelona, Spain. Universitat Autònoma de Barcelona, Bellaterra, Spain. [Godoy C, Tabernero D, Rodríguez-Frías F] Unitat de Patologia Hepàtica, Servei de Bioquímica i Servei de Microbiologia, Vall d’Hebron Hospital Universitari, Barcelona, Spain. Universitat Autònoma de Barcelona, Bellaterra, Spain. Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (CIBERehd), Instituto De Salud Carlos III, Madrid, Spain. [Quer J] Liver Unit, Liver Disease Laboratory Viral Hepatitis, Vall d’Hebron Institut de Recerca (VHIR), Barcelona, Spain. Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (CIBERehd), Instituto De Salud Carlos III, Madrid, Spain. [Pacín Ruiz B, García-García S] Liver Unit, Liver Disease Laboratory Viral Hepatitis, Vall d’Hebron Institut de Recerca (VHIR), Barcelona, Spain
Vall d'Hebron Barcelona Hospital Campus
Source :
Scientific Reports, Vol 11, Iss 1, Pp 1-11 (2021), Scientia, Scientific Reports, Dipòsit Digital de Documents de la UAB, Universitat Autònoma de Barcelona
Publication Year :
2021
Publisher :
Nature Portfolio, 2021.

Abstract

Haplotipos; Enfermedades infecciosas; Mutación Haplotips; Enfermetats infeccioses; Mutació Haplotypes; Infectious diseases; Mutation Patients with HBeAg-negative chronic infection (CI) have not been extensively studied because of low viremia. The HBx protein, encoded by HBX, has a key role in viral replication. Here, we analyzed the viral quasispecies at the 5′ end of HBX in CI patients and compared it with that of patients in other clinical stages. Fifty-eight HBeAg-negative patients were included: 16 CI, 19 chronic hepatitis B, 16 hepatocellular carcinoma and 6 liver cirrhosis. Quasispecies complexity and conservation were determined in the region between nucleotides 1255 and 1611. Amino acid changes detected were tested in vitro. CI patients showed higher complexity in terms of mutation frequency and nucleotide diversity and higher quasispecies conservation (p

Details

Language :
English
ISSN :
20452322
Volume :
11
Issue :
1
Database :
OpenAIRE
Journal :
Scientific Reports
Accession number :
edsair.doi.dedup.....0164414ac12aeae3566ee0e9ad2957d6