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Identification of circRNA-associated ceRNA network in BMSCs of OVX models for postmenopausal osteoporosis

Authors :
Youwen Liu
Kaifeng Zhou
Zhongyue Huang
Huichao Wang
Jun Xu
Fangzhu Xiao
Huijie Gu
Guangnan Chen
Source :
Scientific Reports, Scientific Reports, Vol 10, Iss 1, Pp 1-11 (2020)
Publication Year :
2020

Abstract

Circular RNAs (circRNAs) serve as competing endogenous RNAs (ceRNAs) and indirectly regulate gene expression through shared microRNAs (miRNAs). However, the potential circRNAs functioning as ceRNAs in osteoporosis remain unclear. The bone marrow mesenchymal stem cells (BMSCs) were isolated from ovariectomy (OVX) mice and controls. We systematically analyzed RNA‐seq and miRNA‐microarray data, miRNA‐target interactions, and prominently coexpressed gene pairs to identify aberrantly expressed circRNAs, miRNAs, and messenger RNAs (mRNAs) between the OVX mice and controls. A total of 45 circRNAs, 22 miRNAs, and 548 mRNAs were significantly dysregulated (fold change > 1.5; p

Details

ISSN :
20452322
Volume :
10
Issue :
1
Database :
OpenAIRE
Journal :
Scientific reports
Accession number :
edsair.doi.dedup.....005a2f3bafd3bfc907de71a0a5ee4f73