Back to Search
Start Over
The dynseq genome browser track enables visualization of context-specific, dynamic DNA sequence features at single nucleotide resolution
- Publication Year :
- 2022
- Publisher :
- Cold Spring Harbor Laboratory, 2022.
-
Abstract
- We introduce the dynseq genome browser track, which displays DNA nucleotide characters scaled by user-specified, base-resolution scores provided in the BigWig file format. The dynseq track enables visualization of context-specific, informative genomic sequence features. We demonstrate its utility in three popular genome browsers for interpreting cis-regulatory sequence syntax and regulatory variant interpretation by visualizing nucleotide importance scores derived from machine learning models of regulatory DNA trained on protein-DNA binding and chromatin accessibility experiments.
Details
- Database :
- OpenAIRE
- Accession number :
- edsair.doi...........d7b4c3a730ec84d04a16ee2f62c8f175
- Full Text :
- https://doi.org/10.1101/2022.05.26.493621