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Draft genome sequence of the oilseed species Ricinus communis

Authors :
Melaku Gedil
Qi Zhao
Jacques Ravel
Kristine M Jones
Pablo D. Rabinowicz
Brian J. Haas
Julia C. Redman
Mario Stanke
Hernan Lorenzi
Daniela Puiu
Joshua Orvis
Agnes P. Chan
Grace Q. Chen
Jennifer R. Wortman
Admasu Melake-Berhan
Jonathan Crabtree
Claire M. Fraser-Liggett
Edgar B. Cahoon
Source :
Nature Biotechnology. 28:951-956
Publication Year :
2010
Publisher :
Springer Science and Business Media LLC, 2010.

Abstract

Castor bean (Ricinus communis) is an oilseed crop that belongs to the spurge (Euphorbiaceae) family, which comprises approximately 6,300 species that include cassava (Manihot esculenta), rubber tree (Hevea brasiliensis) and physic nut (Jatropha curcas). It is primarily of economic interest as a source of castor oil, used for the production of high-quality lubricants because of its high proportion of the unusual fatty acid ricinoleic acid. However, castor bean genomics is also relevant to biosecurity as the seeds contain high levels of ricin, a highly toxic, ribosome-inactivating protein. Here we report the draft genome sequence of castor bean (4.6-fold coverage), the first for a member of the Euphorbiaceae. Whereas most of the key genes involved in oil synthesis and turnover are single copy, the number of members of the ricin gene family is larger than previously thought. Comparative genomics analysis suggests the presence of an ancient hexaploidization event that is conserved across the dicotyledonous lineage.

Details

ISSN :
15461696 and 10870156
Volume :
28
Database :
OpenAIRE
Journal :
Nature Biotechnology
Accession number :
edsair.doi...........cdcbaced29a62e94675660c4e62f6189
Full Text :
https://doi.org/10.1038/nbt.1674