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Development of a High-Performance Multiparametric MRI Oropharyngeal Primary Tumor Auto-Segmentation Deep Learning Model and Investigation of Input Channel Effects: Results from a Prospective Imaging Registry

Authors :
Mohamed A. Naser
Vivian Salama
Travis C. Salzillo
Cem Dede
Jonas Teuwen
Sara Ahmed
Stephen Y. Lai
Clifton D. Fuller
Nicolette Taku
Lisanne V. van Dijk
Renjie He
Brigid A. McDonald
Abdallah S.R. Mohamed
Kareem Wahid
Publication Year :
2021
Publisher :
Cold Spring Harbor Laboratory, 2021.

Abstract

Background and PurposeOropharyngeal cancer (OPC) primary gross tumor volume (GTVp) segmentation is crucial for radiotherapy. Multiparametric MRI (mpMRI) is increasingly used for OPC adaptive radiotherapy but relies on manual segmentation. Therefore, we constructed mpMRI deep learning (DL) OPC GTVp auto-segmentation models and determined the impact of input channels on segmentation performance.Materials and MethodsGTVp ground truth segmentations were manually generated for 30 OPC patients from a clinical trial. We evaluated five mpMRI input channels (T2, T1, ADC, Ktrans, Ve). 3D Residual U-net models were developed and assessed using leave-one-out cross-validation. A baseline T2 model was compared to mpMRI models (T2+T1, T2+ADC, T2+Ktrans, T2+Ve, all 5 channels [ALL]) primarily using the Dice similarity coefficient (DSC). Sensitivity, positive predictive value, Hausdorff distance (HD), false-negative DSC (FND), false-positive DSC, surface DSC, 95% HD, and mean surface distance were also assessed. For the best model, ground truth and DL-generated segmentations were compared through a Turing test using physician observers.ResultsModels yielded mean DSCs from 0.71 (ALL) to 0.73 (T2+T1). Compared to the T2 model, performance was significantly improved for HD, FND, sensitivity, surface DSC, and 95% HD for the T2+T1 model (p0.05).ConclusionDL using mpMRI provides high-quality segmentations of OPC GTVp. Incorporating additional mpMRI channels may increase the performance of certain evaluation metrics. This pilot study is a promising step towards fully automated MR-guided OPC radiotherapy.

Details

Database :
OpenAIRE
Accession number :
edsair.doi...........c78e104b5e6d0df6e28415c3134a1be3