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DataBiNS-Viz: A Web-Based Tool for Visualization of Non-Synonymous SNP Data

Authors :
Scott J. Tebbutt
Fong Chun Chan
Mark Wilkinson
Edward A. Kawas
Source :
Journal of Proteomics & Bioinformatics. :233-236
Publication Year :
2008
Publisher :
OMICS Publishing Group, 2008.

Abstract

Here we describe DataBiNS-Viz – a visualization and exploration environment for non-synonymous coding single nucleotide polymorphisms (nsSNPs) data gathered by the BioMoby-based DataBiNS workflow. DataBiNSViz enables execution of the DataBiNS workflow on pr oteins described by KEGG , PubMed, or OMIM identifiers, followed by manual exploration of the integrated structure/function and pathway data for those proteins, with a particular focus on nsSNP data in-context. The tool can be freely accessed at http://bioinfo.icapture.ubc.ca:8090/ DataBiNS (please use the Firefox or Safari web browsers). Examples of the retrieved data are given under the “Help on inputs” option. Detailed documentation can be accessed at http://bioinf o.icapture.ubc.ca/mywiki/ DataBiNS.

Details

ISSN :
0974276X
Database :
OpenAIRE
Journal :
Journal of Proteomics & Bioinformatics
Accession number :
edsair.doi...........c2f0b9298e8d6f3529fc9f048da59828