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Brachybacterium subflavum sp. nov., a novel actinobacterium isolated from the foregut of grass carp

Authors :
Cui Caixia
Bing-Fang Yi
Guoxing Nie
Li-Jiao Cheng
Zi-yu Zhao
Ming-Ming Niu
Bing-bing Liu
Hong Ming
Ting-Ting Xia
Source :
International Journal of Systematic and Evolutionary Microbiology. 71
Publication Year :
2021
Publisher :
Microbiology Society, 2021.

Abstract

A novel actinobacterium, designated CFH 10395T, was isolated from the foregut of grass carp (Ctenopharyngodon idella), which had been fed with ginseng extract supplement. The taxonomic position was investigated by a polyphasic approach. Cells of CFH 10395Twere Gram-staining-positive, aerobic, ovoid-shaped, non-spore-forming and non-motile. On the basis of the results of 16S rRNA gene sequence analysis, CFH 10395Twas most closely related toBrachybacterium endophyticumKCTC 49087T,Brachybacterium squillarumJCM 16464TandBrachybacterium paraconglomeratumJCM 17781T(97.85%, 97.51 and 97.29% similarity, respectively). CFH 10395Tgrew at 4–37 °C, pH 5.0–9.0 and in the presence of up to 10.0 % NaCl (w/v). The dominant menaquinone was MK-7. The whole-cell sugars were rhamnose, glucose, mannose and galactose.meso-diaminopimelic acid was the diagnostic diamino acid in the cell-wall peptidoglycan. The major fatty acids were anteiso-C15 : 0, anteiso-C17 : 0and iso-C16 : 0. The genome size was 3.99 Mbp with a DNA G+C content of 71.9 mol%. On the basis of the results of phylogenetic analysis, physiological properties, chemotaxonomic characteristics, low average nucleotide identity (ANI) and digital DDH (dDDH) results [ANI calculated using MUMmer (ANIm) blast(ANIb) Trepresents a novel species of the genusBrachybacterium, for which the nameBrachybacterium subflavumsp. nov., is proposed. The type strain is CFH 10395T(=CGMCC 1.13804T=KCTC 49235T).

Details

ISSN :
14665034 and 14665026
Volume :
71
Database :
OpenAIRE
Journal :
International Journal of Systematic and Evolutionary Microbiology
Accession number :
edsair.doi...........beebbf703955892751d6ffc0b714ccc6
Full Text :
https://doi.org/10.1099/ijsem.0.004839