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The Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work

Authors :
Eric W Deutsch
Juan Antonio VizcaĆ­no
Andrew R Jones
Pierre-Alain Binz
Henry Lam
Joshua Klein
Wout Bittremieux
Yasset Perez-Riverol
David L Tabb
Mathias Walzer
Sylvie Ricard-Blum
Henning Hermjakob
Steffen Neumann
Tytus D Mak
Shin Kawano
Luis Mendoza
Tim Van Den Bossche
Ralf Gabriels
Nuno Bandeira
Jeremy Carver
Benjamin Pullman
Zhi Sun
Nils Hoffmann
Jim Shofstahl
Yunping Zhu
Luana Licata
Federica Quaglia
Silvio CE Tosatto
Sandra E Orchard
Publication Year :
2022
Publisher :
American Chemical Society (ACS), 2022.

Abstract

The Human Proteome Organization (HUPO) Proteomics Standards Initiative (PSI) has been successfully developing guidelines, data formats, and controlled vocabularies (CVs) for the proteomics community and other fields supported by mass spectrometry since its inception twenty years ago. Here we describe the general operation of the PSI, including its leadership, working groups, yearly workshops, and the document process by which proposals are thoroughly and publicly reviewed in order to be ratified as PSI standards. We briefly describe the current state of the many existing PSI standards, some of which remain the same as when originally developed, some of which have undergone subsequent revisions, and some of which have become obsolete. Then the set of proposals currently being developed are described, with an open call to the community for participation in the forging of the next generation of standards. Finally, we describe some synergies and collaborations with other organizations and look to the future in how the PSI will continue to promote the open sharing of data and thus accelerate the progress of the field of proteomics.

Details

Database :
OpenAIRE
Accession number :
edsair.doi...........ba7caa58ce0d862afd310bf15929bc27