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Absorption and rotation of light by helical oligomers: The nearest neighbor approximation

Authors :
R. W. Woody
Dan F. Bradley
Ignacio Tinoco
Source :
Biopolymers. 1:239-267
Publication Year :
1963
Publisher :
Wiley, 1963.

Abstract

Explicit expressions for the DK and RK associated with the excitation of regular oligomers from their ground states to the Kth exciton state as functions of N, P, μ, μ∥, μt, and μr have been derived on the assumption that the only perturbation Vij to the N singly excited states results from exciton transfer between adjacent residues, V12. The DK relation predicts the occurrence of a perpendicularly polarized absorption band arising from μ⟂ and a parallel polarized band from μ∥ with maxima at K = [2(N + 1)/P] and 1, which are shifted from the monomer band by 2V12 cos(2π/P) and 2V12cos[π/(N + 1)], respectively. Overlapping of the bands, which may occur in oligomers, decreases rapidly with N, leaving two perfectly polarized bands in the polymer. Within each band which includes only a few levels near the maxima, the most probable transition may be associated with all of the intensity for very short chains but only 40.2–50% (⟂) and 80.9% (∥) as N ∞ (polymer case). A relation was derived by which V12 may be simply calculated from μ, μr, μt, μ∥, a, and z. The nearest neighbor theory was compared with experiment by calculating a reasonable set of the relevant parameters which exactly account for known spectral shifts.

Details

ISSN :
10970282 and 00063525
Volume :
1
Database :
OpenAIRE
Journal :
Biopolymers
Accession number :
edsair.doi...........b44a84199aea03dee23a3e2f3db86891
Full Text :
https://doi.org/10.1002/bip.360010305