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High-Quality Genome Resource of Clonostachys rosea Strain CanS41 by Oxford Nanopore Long-Read Sequencing

Authors :
Jin-Rong Xu
Huiquan Liu
Guoqing Li
Qinhu Wang
Yongrong Dong
Weixue Liao
Haoming Wang
Xin Zhang
Source :
Plant Disease. 105:2231-2234
Publication Year :
2021
Publisher :
Scientific Societies, 2021.

Abstract

Clonostachys rosea is a necrotrophic mycoparasitic fungus with excellent biological control ability against numerous fungal plant pathogens. Here, we performed genomic sequencing of C. rosea strain CanS41 using Oxford Nanopore sequencing technology. We generated a high-quality genome assembly (>99.99% accuracy), which comprised 26 contigs containing 60.68 Mb sequences with a GC content of 48.55% and a repeat content of 8.38%. The N50 contig length is 3.02 Mb. In total, 20,818 protein-coding genes were identified and functionally annotated. Genes encoding secreted proteins and carbohydrate-active enzymes as well as secondary metabolic gene clusters were also identified and analyzed. In summary, the high-quality genome assembly and gene annotation provided here will allow further exploration of biological functions and enhance biological control ability of C. rosea.

Details

ISSN :
19437692 and 01912917
Volume :
105
Database :
OpenAIRE
Journal :
Plant Disease
Accession number :
edsair.doi...........b294b58b5540b539a3d097232fdea121