Paper-based DNA sensor enabling colorimetric assay integrated with smartphone for human papillomavirus detection

Human papillomavirus (HPV) is one of the most common sexually transmitted infections which causes cervical cancer in women. In order to avoid the development of cancer and the onset of the disease, a reliable and on-site diagnosis for early screening of HPV is still required. To achieve this goal, a smartphone-assisted paper-based colorimetric assay using pyrrolidinyl peptide nucleic acid (acpcPNA) as a probe for the detection of HPV DNA was developed. Dextrin-stabilized gold nanoparticles (d-AuNPs) were used as the colorimetric reagent. The aggregation of the d-AuNPs can be induced by the outstanding properties of the positively charged acpcPNA, generating a distinctive color change. After the duplex formation between the acpcPNA probe and the HPV DNA target, the acpcPNA probe was depleted and the residual probe can cause different degrees of d-AuNPs aggregation, resulting in a detectable color change. The different color change before and after the introduction of the DNA target as a function of the DNA concentration was quantified by analyzing the color intensity through a smartphone application. Under the optimal conditions, the linearity in the range from 1 to 1000 nM with a correlation coefficient of 0.9996 and an experimental limit of detection of 1 nM was obtained. In addition, the acpcPNA probe exhibited high selectivity for the DNA target over single-base-mismatch, two-base-mismatch, and non-complementary DNA. Moreover, this DNA sensor was successfully applied for the detection of HPV DNA from cell line samples. The proposed smartphone-based colorimetric DNA sensor offers a simple, sensitive, and selective way of detecting HPV DNA. Therefore, this DNA sensing device can be utilized as an alternative tool for the point-of-care (POC) screening of HPV.