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Additional file 1: of Comprehensive profiling of functional Epstein-Barr virus miRNA expression in human cell lines

Authors :
Hooykaas, Marjolein
Kruse, Elisabeth
Wiertz, Emmanuel
Lebbink, Robert
Publication Year :
2016
Publisher :
Figshare, 2016.

Abstract

List of miRNA sequences and perfect target sequences. List of miRNA sequences annotated in miRBase or (*) based on deep sequencing data from Chen et al. 2010 (column 2). Perfect target sequences (column 3) were cloned downstream of the mCherry reporter gene to monitor miRNA expression. # The deep-sequencing analysis in Fig. 3 identified a single nucleotide change (position 17, T changed to C) in the mature miR-BART19-5p miRNA sequence in the C666-1 strain. Therefore, the miR-BART19-5p miRNA sensor used in the C666-1 cells to monitor miRNA activity does not fully match the miR-BART19-5p sequence expressed in these cells (DOCX 20 kb)

Details

Database :
OpenAIRE
Accession number :
edsair.doi...........acaef6f7eab4fa88dfb593b9e0e0ce4c
Full Text :
https://doi.org/10.6084/m9.figshare.c.3615557_d2