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Ligand binding specificity of theEscherichia coliperiplasmic histidine binding protein, HisJ
- Source :
- Protein Science. 26:268-279
- Publication Year :
- 2016
- Publisher :
- Wiley, 2016.
-
Abstract
- The HisJ protein from Escherichia coli and related Gram negative bacteria is the periplasmic component of a bacterial ATP-cassette (ABC) transporter system. Together these proteins form a transmembrane complex that can take up L-histidine from the environment and translocate it into the cytosol. We have studied the specificity of HisJ for binding L-His and many related naturally occurring compounds. Our data confirm that L-His is the preferred ligand, but that 1-methyl-L-His and 3-methyl-L-His can also bind, while the dipeptide carnosine binds weakly and D-histidine and the histidine degradation products, histamine, urocanic acid and imidazole do not bind. L-Arg, homo-L-Arg, and post-translationally modified methylated Arg-analogs also bind with reasonable avidity, with the exception of symmetric dimethylated-L-Arg. In contrast, L-Lys and L-Orn have considerably weaker interactions with HisJ and methylated and acetylated Lys variants show relatively poor binding. It was also observed that the carboxylate group of these amino acids and their variants was very important for proper recognition of the ligand. Taken together our results are a key step towards designing HisJ as a specific protein-based reagentless biosensor.
- Subjects :
- 0301 basic medicine
chemistry.chemical_classification
Dipeptide
Chemistry
Ligand binding assay
Periplasmic space
Ligand (biochemistry)
medicine.disease_cause
Biochemistry
Transmembrane protein
Amino acid
03 medical and health sciences
Urocanic acid
chemistry.chemical_compound
030104 developmental biology
medicine
Molecular Biology
Escherichia coli
Subjects
Details
- ISSN :
- 09618368
- Volume :
- 26
- Database :
- OpenAIRE
- Journal :
- Protein Science
- Accession number :
- edsair.doi...........abbeb7f0970b7b5f3a39d01041a8ed69
- Full Text :
- https://doi.org/10.1002/pro.3079