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Comparison of intrinsic dynamics of cytochrome p450 proteins using normal mode analysis

Authors :
Shane W. Hodgson
Mariah E. Dorner
Beatrice R. Soderholm
Christopher A. Monte
Jessica M. Dulli
Justin W. Mabin
Daniel L. Mazula
Shawn W. Keenan
Sanchita Hati
Augustus Olthafer
Cody R. Fisher
Alexander M. Strom
Ryan D. McMunn
Samuel C. Fehling
Ashley E. Sexton
Brecken E. Calhoon
Michelle R. Conlon
Alyssa N. Kruger
Thomas G. Bartholow
Source :
Protein Science. 24:1495-1507
Publication Year :
2015
Publisher :
Wiley, 2015.

Abstract

Cytochrome P450 enzymes are hemeproteins that catalyze the monooxygenation of a wide-range of structurally diverse substrates of endogenous and exogenous origin. These heme monooxygenases receive electrons from NADH/NADPH via electron transfer proteins. The cytochrome P450 enzymes, which constitute a diverse superfamily of more than 8,700 proteins, share a common tertiary fold but 55% and Bhattacharyya coefficient > 80%), despite the low sequence identity (< 25%) and sequence similarity (< 50%) across the cytochrome P450 superfamily. Noticeable differences in Cα atom fluctuations of structural elements responsible for substrate binding were noticed. These differences in residue fluctuations might be crucial for substrate selectivity in these enzymes.

Details

ISSN :
09618368
Volume :
24
Database :
OpenAIRE
Journal :
Protein Science
Accession number :
edsair.doi...........aad466d653645f8fe73e2e3f25dbbc12