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Heterogeneity of RNA editing in mesothelioma and how RNA editing enzyme ADAR2 affects mesothelioma cell growth, response to chemotherapy and tumor microenvironment

Authors :
Ananya Hariharan
Weihong Qi
Hubert Rehrauer
Licun Wu
Manuel Ronner
Martin Wipplinger
Jelena Kresoja-Rakic
Suna Sun
Lucia Oton-Gonzalez
Marika Sculco
Véronique Serre-Beinier
Clément Meiller
Christophe Blanquart
Jean-François Fonteneau
Bart Vrugt
Jan Hendrik Rüschoff
Isabelle Opitz
Didier Jean
Marc de Perrot
Emanuela Felley-Bosco
Publication Year :
2022
Publisher :
Cold Spring Harbor Laboratory, 2022.

Abstract

We previously observed increased levels of adenosine-deaminase-acting-on-dsRNA (Adar)-dependent RNA editing during mesothelioma development in mice exposed to asbestos. The aim of this study was to characterize and assess the role of ADAR-dependent RNA editing in mesothelioma. Tumors and mesothelioma primary cultures have higher ADAR-mediated RNA editing compared to mesothelial cells. Unsupervised clustering of editing in different genomic regions revealed heterogeneity between tumor samples as well as mesothelioma primary cultures. ADAR2 expression levels are higher in BRCA1-associated protein 1 wild-type tumors, with corresponding changes in RNA editing in transcripts and 3’UTR. ADAR2 knockdown and rescue models indicated a role in cell proliferation, altered cell cycle, increased sensitivity to antifolate treatment and type-1 interferon signaling upregulation, leading to changes in the microenvironment in vivo. Our data indicate that RNA editing contributes to mesothelioma heterogeneity and highlights an important role of ADAR2 not only in growth regulation in mesothelioma but also chemotherapy response, in addition to regulating inflammatory response downstream of sensing nucleic acid structures.

Details

Database :
OpenAIRE
Accession number :
edsair.doi...........a9067d1d9a18d38cbd70f1c87abe4b2f
Full Text :
https://doi.org/10.1101/2022.07.12.499727