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Effect on catalysis by replacement of catalytic residue from hen egg white lysozyme toVenerupis philippinarumlysozyme*
- Source :
- Protein Science. 25:1637-1647
- Publication Year :
- 2016
- Publisher :
- Wiley, 2016.
-
Abstract
- Asn46Asp/Asp52Ser or Asn46Glu/Asp52Ser hen egg white lysozyme (HEL) mutant was designed by introducing the substituted catalytic residue Asp46 or Glu46, respectively, based on Venerupis philippinarum (Vp) lysozyme structure as a representative of invertebrate-type (i-type) lyzozyme. These mutations restored the bell-shaped pH-dependency of the enzyme activity from the sigmoidal pH-dependency observed for the Asp52Ser mutant. Furthermore both lysozyme mutants possessed retaining mechanisms like Vp lysozyme and HEL. The Asn46Glu/Asp52Ser mutant, which has a shorter distance between two catalytic residues, formed a glycosyl adduct in the reaction with the N-acetylglucosamine oligomer. Furthermore, we found the accelerated turnover through its glycosyl adduct formation and decomposition. The turnover rate estimated from the glycosyl formation and decomposition rates was only 20% of the observed hydrolysis rate of the substrate. Based on these results, we discussed the catalytic mechanism of lysozymes.
- Subjects :
- 0301 basic medicine
030102 biochemistry & molecular biology
biology
Chemistry
Mutant
biology.organism_classification
Biochemistry
Enzyme assay
Adduct
03 medical and health sciences
chemistry.chemical_compound
030104 developmental biology
Venerupis philippinarum
Hydrolase
biology.protein
Glycoside hydrolase
Glycosyl
Lysozyme
Molecular Biology
Subjects
Details
- ISSN :
- 09618368
- Volume :
- 25
- Database :
- OpenAIRE
- Journal :
- Protein Science
- Accession number :
- edsair.doi...........9a30e7ba20372a1b5fc3777c6d72c1b2
- Full Text :
- https://doi.org/10.1002/pro.2966