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Undibacterium piscinae sp. nov., isolated from Korean shiner intestine

Authors :
Ji-Hyun Yun
Na-Ri Shin
Yun-Seok Jeong
So-Yeon Lee
Jeong Eun Han
Mi-Ja Jung
Hyun Sik Kim
June-Young Lee
Jae-Yun Lee
Ki-Eun Lee
Myung-Suk Kang
Woorim Kang
Tae Woong Whon
Dong-Wook Hyun
Jin-Woo Bae
Hojun Sung
Byoung-Hee Lee
Euon Jung Tak
Pil Soo Kim
Source :
International Journal of Systematic and Evolutionary Microbiology. 69:3148-3154
Publication Year :
2019
Publisher :
Microbiology Society, 2019.

Abstract

A novel Gram-stain-negative, non-spore-forming, obligate aerobic, motile, rod-shaped, and flagellated bacterium, designated S11R28T, was isolated from the intestinal tract of a Korean shiner, Coreoleuciscus splendidus. Based on 16S rRNA gene sequences, strain S11R28T was identified as member of the genus Undibacterium in class Betaproteobacteria , and was closely related to Undibacterium parvum DSM 23061T (98.49 %). The isolate grew at 4–25 °C, pH 6–9, with 0 % (w/v) NaCl, and grew optimally at 20 °C, pH 8, in the absence of NaCl. The main cellular fatty acids were C16 : 0 and summed features 3 (C16 : 1ω7c and/or C16 : 1ω6c). The strain possessed diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine as predominant polar lipids, and ubiquinone Q-8 as a respiratory quinone. The polyamine profile composed of 2-hydroxyputrescine, spermidine, putrescine, and benzoic acid. A genomic DNA G+C content was 51.4 mol%. The average nucleotide identity between strains S11R28T and U. parvum DSM 23061T was 78.66 %. Thus, Undibacterium piscinae can be considered a novel species within the genus Undibacterium with the type strain S11R28T (=KCTC 62668T=JCM 33224T).

Details

ISSN :
14665034 and 14665026
Volume :
69
Database :
OpenAIRE
Journal :
International Journal of Systematic and Evolutionary Microbiology
Accession number :
edsair.doi...........842cda0d885c6d810198353c869dd1b4