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Genome Sequence of Rhizoctonia solani Anastomosis Group 4 Strain Rhs4ca, a Widespread Pathomycete in Field Crops
- Source :
- Molecular Plant-Microbe Interactions®. 34:826-829
- Publication Year :
- 2021
- Publisher :
- Scientific Societies, 2021.
-
Abstract
- Rhizoctonia solani is an important soil-borne fungal pathogen that causes serious diseases on many agricultural crops and vegetables. Here, we report a complete genome assembly of R. solani AG4 (assembly: 45.47 Mb; contig N50: 1.56 Mb), using a combination of Illumina paired-end and PacBio long-read sequencing data. A total of 267 noncoding RNAs and 11,592 genes were predicted, including 109 genes associated with carbohydrate-active enzymes and 2,488 genes involved in host-pathogen interactions. The complete genome of R. solani AG4 represents a valuable base for studying interactions between host plants and pathogenic fungi and to search for potential antimicrobial targets. [Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .
- Subjects :
- 0106 biological sciences
Whole genome sequencing
0303 health sciences
biology
Physiology
Strain (biology)
food and beverages
General Medicine
Fungal pathogen
biology.organism_classification
01 natural sciences
Genome
Rhizoctonia solani
03 medical and health sciences
Horticulture
Anastomosis group
Agronomy and Crop Science
Agricultural crops
030304 developmental biology
010606 plant biology & botany
Subjects
Details
- ISSN :
- 19437706 and 08940282
- Volume :
- 34
- Database :
- OpenAIRE
- Journal :
- Molecular Plant-Microbe Interactions®
- Accession number :
- edsair.doi...........77a62be4d4006f33c0c5759b790ccd44
- Full Text :
- https://doi.org/10.1094/mpmi-12-20-0362-a