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Protein Domains of GTPases on Membranes: Do They Rely on Turing’s Mechanism?

Authors :
Perla Del Conte-Zerial
Andreas Deutsch
Marino Zerial
Bianca Habermann
Lutz Brusch
Yannis Kalaidzidis
Jochen C. Rink
Source :
Mathematical Modeling of Biological Systems ISBN: 9780817645571
Publication Year :
2007
Publisher :
Birkhäuser Boston, 2007.

Abstract

We evaluate different mechanisms for spatial domain formation of guanosine triphosphatases (GTPases) on cellular membranes. A kinetic model of the basic guanine-nucleotide cycle common to all GTPases is developed and coupled along a one-dimensional axis by diffusion of inactive and activated GTPases. We ask whether a parameter set exists such that domain formation is possible by Turing’s mechanism, i.e., purely by reactions and diffusion, and show that the Turing instability does not occur in this model for any parameter combination. But, as revealed by stability and bifurcation analysis, domain formation is reproduced after augmenting the model with combinations of two spatial interaction mechanisms: 1. attraction and 2. adhesion among active GTPases. These interactions can be mediated by effector proteins that bind active GTPases, and the model therefore predicts domains to disintegrate if effector binding is inhibited.

Details

ISBN :
978-0-8176-4557-1
ISBNs :
9780817645571
Database :
OpenAIRE
Journal :
Mathematical Modeling of Biological Systems ISBN: 9780817645571
Accession number :
edsair.doi...........75252b11967fe272a6140866b27d3727
Full Text :
https://doi.org/10.1007/978-0-8176-4558-8_4