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KuLGaP: A Selective Measure for Assessing Therapy Response in Patient-Derived Xenografts

Authors :
Céline Mascaux
Catherine A. O’Brien
Jessica Weiss
Nhu-An Pham
Geoffrey Liu
Aline Fusco Fares
Denis Tkachuk
Chantal Ho
Benjamin Haibe-Kains
Gangesh Beri
Elijah Tai
Anna Goldenberg
Ruoshi Shi
Arvind Singh Mer
David W. Cescon
Ming-Sound Tsao
Sheng Guo
Ladislav Rampášek
Shingo Sakashita
Janosch Ortmann
Erin L. Stewart
Xiaoqian Jiang
Christopher Eeles
Publication Year :
2020
Publisher :
Cold Spring Harbor Laboratory, 2020.

Abstract

Quantifying response to drug treatment in mouse models of human cancer is important for treatment development and assignment, and yet remains a challenging task. A preferred measure to quantify this response should take into account as much of the experimental data as possible, i.e. both tumor size over time and the variation among replicates. We propose a theoretically grounded measure, KuLGaP, to compute the difference between the treatment and control arms. KuLGaP is more selective than currently existing measures, reduces the risk of false positive calls and improves translation of the lab results to clinical practice.

Details

Database :
OpenAIRE
Accession number :
edsair.doi...........3ee89a709fc50ab41775b3a188c61ebc
Full Text :
https://doi.org/10.1101/2020.09.08.287573