Genetic effects of historical anthropogenic disturbance on a long-lived endangered tropical tree Vatica mangachapoi

The endangered Vatica mangachapoi, a long-lived, tropical tree with economic and ecological importance found in Hainan, China, was used to assess the hypothesis that historical human activities in Hainan’s tropical rain forest could have negative effects on the genetic diversity of V. mangachapoi. Three hundred and twenty individuals from 11 natural populations—which were classified into three groups according to levels of disturbance—were sampled and analyzed with ISSR markers. Although genetic diversity of V. mangachapoi is high at the species level, it is relatively low within populations. A significant genetic differentiation occurs among different disturbance levels. Significant isolation-by-distance indicated relevant historical anthropogenic changes. Our findings showed that historical human disturbances significantly increase the genetic differentiation and slightly decrease the genetic diversity of long-lived tree V. mangachapoi. Relevant targeting conservation actions were recommended.