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Performing a BLAST search of the STRSeq BioProject

Authors :
Katherine Butler Gettings
Peter M. Vallone
Lisa A. Borsuk
Source :
Forensic Science International: Genetics Supplement Series. 6:e372-e374
Publication Year :
2017
Publisher :
Elsevier BV, 2017.

Abstract

At the 27th ISFG meeting in Seoul, we presented STRSeq, a catalog of high-confidence sequences at forensic short tandem repeat (STR) loci targeted in commercially available sequencing assays. This project was initiated to facilitate the description of sequence-based alleles, providing a framework for communication among laboratories. The STRSeq catalog is maintained at NCBI, in the form of GenBank records organized in a BioProject hierarchy. Herein we describe a method by which a user can query this catalog using the NCBI BLAST application.

Details

ISSN :
18751768
Volume :
6
Database :
OpenAIRE
Journal :
Forensic Science International: Genetics Supplement Series
Accession number :
edsair.doi...........326d07536b1c0c499db1224c863ef97f
Full Text :
https://doi.org/10.1016/j.fsigss.2017.09.173