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Model Reduction of Genetic-Metabolic Networks via Time Scale Separation

Authors :
Juan Kuntz
Guy-Bart Stan
Diego A. Oyarzún
Source :
A Systems Theoretic Approach to Systems and Synthetic Biology I: Models and System Characterizations ISBN: 9789401790406
Publication Year :
2014
Publisher :
Springer Netherlands, 2014.

Abstract

Model reduction techniques often prove indispensable in the analysis of physical and biological phenomena. A succesful reduction technique can substantially simplify a model while retaining all of its pertinent features. In metabolic networks, metabolites evolve on much shorter time scales than the catalytic enzymes. In this chapter, we exploit this discrepancy to justify the reduction via time scale separation of a class of models of metabolic networks under genetic regulation . We formalise the concept of a metabolic network and employ Tikhonov’s Theorem for singularly perturbed systems. We demonstrate the applicability of our result by using it to address a problem in metabolic engineering: the genetic control of branched metabolic pathways. We conclude by providing guidelines on how to generalise our result to larger classes of networks.

Details

ISBN :
978-94-017-9040-6
ISBNs :
9789401790406
Database :
OpenAIRE
Journal :
A Systems Theoretic Approach to Systems and Synthetic Biology I: Models and System Characterizations ISBN: 9789401790406
Accession number :
edsair.doi...........185f4b7241e9f51c8cecd66fc81c0bb7