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Density functional calculation of the electronic structure on insulin hexamer

Authors :
Fumitoshi Sato
Naoki Tsunekawa
Hiroshi Kashiwagi
Tamotsu Yoshihiro
Toshiyuki Hirano
Toru Inaba
Source :
Chemical Physics Letters. 434:331-335
Publication Year :
2007
Publisher :
Elsevier BV, 2007.

Abstract

An all-electron calculation on the non-symmetric insulin hexamer was successfully carried out using a precise initial guess of the combined quasi-canonical localized orbitals and the parallel density functional program employing the distributed matrices. The numbers of residues, atoms, and orbitals were 306, 4728, and 26 790, respectively. To our knowledge, insulin hexamer is the largest system calculated using the full-scale canonical density functional molecular orbital method. The calculation for the initial guess and the insulin hexamer took 26.5 h using 24 Xeon processors (3.2 GHz) and 65 h using 64 Itanium 2 processors (1.3 GHz), respectively.

Details

ISSN :
00092614
Volume :
434
Database :
OpenAIRE
Journal :
Chemical Physics Letters
Accession number :
edsair.doi...........11c3bd4e2f118647466bb3182bb3d1e7
Full Text :
https://doi.org/10.1016/j.cplett.2006.12.024