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Development of microsatellite markers for an outbreaking species of oak gall wasp,Zapatella davisae(Hymenoptera: Cynipidae), in the northeastern United States
- Source :
- Bulletin of Entomological Research. 109:510-517
- Publication Year :
- 2018
- Publisher :
- Cambridge University Press (CUP), 2018.
-
Abstract
- Populations of the recently described black oak gall wasp,Zapatella davisaeBuffington (Hymenoptera: Cynipidae), have been identified as the cause of extensive tree damage and mortality to black oaks,Quercus velutinaLamarck (Fagales: Fagaceae), in the northeastern United States. Relatively little is known, however, about the distribution, phylogenetic placement, and lifecycle of this important tree pest. Therefore, we conducted next-generation sequencing using the Ion Torrent™ PGM (ThermoFisher Scientific, Inc.) platform to develop genomic resources for the study ofZ. davisaeand for other closely related species of oak gall wasps. Individual sequence reads were aligned, assembled into unique contigs, and the contigs were then utilized for thein silicoisolation and development of microsatellite markers. In total, we screened 36 candidate microsatellite loci, of which 23 amplified consistently (five polymorphic and 18 monomorphic). We then examined whether the polymorphic loci could be used to infer whether populations ofZ. davisaefrom Cape Cod and Nantucket are sexual or asexual by calculating several metrics of genetic diversity that might indicate the mode of reproduction. These included testing for statistical deviations from Hardy–Weinberg equilibrium (HWE) and for linkage disequilibrium (LD), observations for the presence of the Meselson effect, and by calculating the probability that clonal individuals are more prevalent than would be expected in a randomly mating population. While we found significant deviations from HWE and more clonal individuals than expected, our estimates of the Meselson effect were inconclusive due to limited sampling, and we found no evidence of LD. Therefore, the sexual/asexual status ofZ. davisaepopulations remains uncertain.
- Subjects :
- 0106 biological sciences
Linkage disequilibrium
education.field_of_study
Phylogenetic tree
biology
Population
Quercus velutina
Gall wasp
Zoology
Population genetics
General Medicine
biology.organism_classification
010603 evolutionary biology
01 natural sciences
010602 entomology
Insect Science
Gall
Microsatellite
education
Agronomy and Crop Science
Subjects
Details
- ISSN :
- 14752670 and 00074853
- Volume :
- 109
- Database :
- OpenAIRE
- Journal :
- Bulletin of Entomological Research
- Accession number :
- edsair.doi...........0f54a08ad4a4899d52f64638f6d683b4
- Full Text :
- https://doi.org/10.1017/s0007485318000858