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Active contour based on approximate entropy: application to cell membrane segmentation in confocal microscopy

Authors :
Histace, Aymeric
Bonnefoye, Elizabeth
Garrido, Luis
Matuszewski, Bogdan
Murphy, Mark
ICI
ASTRE
Equipes Traitement de l'Information et Systèmes (ETIS - UMR 8051)
Ecole Nationale Supérieure de l'Electronique et de ses Applications (ENSEA)-Centre National de la Recherche Scientifique (CNRS)-CY Cergy Paris Université (CY)-Ecole Nationale Supérieure de l'Electronique et de ses Applications (ENSEA)-Centre National de la Recherche Scientifique (CNRS)-CY Cergy Paris Université (CY)
Image Processing Group
Barcelona Perceptual Computing lab (BCNPCL)
Universitat de Barcelona (UB)-Universitat de Barcelona (UB)
Advanced Digital and Signal Image Processing Group (ADSIP)
University of Central Lancashire [Preston] (UCLAN)
Liverpool John Morres University - LJMU (UK)
Scitepress
ECSON
TERAFS
Histace, Aymeric
Source :
Proceedings of 7th Biosignals Conference, International Conference on Bio-inspired systems and signal processing, International Conference on Bio-inspired systems and signal processing, Mar 2014, Angers, France. pp.270-277
Publication Year :
2014
Publisher :
HAL CCSD, 2014.

Abstract

International audience; Segmentation of cellular structures is of primary interest in cell imaging for cell shape reconstruction and to provide crucial information about possible cell morphology changes during radiotherapy for instance. From the particular perspective of predictive oncology, this paper reports on a novel method for membrane segmentation from single channel actin tagged fluorescence confocal microscopy images, which remains a challenging task. Proposed method is based on the use of the Approximate Entropy formerly introduced by Pincus embedded within a Geodesic Active Contour approach. Approximate Entropy can be seen as an estimator of the regularity of a particular sequence of values and, consequently, can be used as an edge detector. In this prospective study, a preliminary study on Approximate Entropy as an edge detector function is first proposed with a particular focus on the robustness to noise, and some promising membrane segmentation results obtained on confocal microscopy images are also shown.

Details

Language :
English
Database :
OpenAIRE
Journal :
Proceedings of 7th Biosignals Conference, International Conference on Bio-inspired systems and signal processing, International Conference on Bio-inspired systems and signal processing, Mar 2014, Angers, France. pp.270-277
Accession number :
edsair.dedup.wf.001..f7f015212162efe25b7f539715138b29