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Overlapping genetic architecture between Parkinson disease and melanoma
- Source :
- Acta neuropathologica, vol 139, iss 2
- Publication Year :
- 2020
- Publisher :
- Springer Nature, 2020.
-
Abstract
- Epidemiologic studies have reported inconsistent results regarding an association between Parkinson disease (PD) and cutaneous melanoma (melanoma). Identifying shared genetic architecture between these diseases can support epidemiologic findings and identify common risk genes and biological pathways. Here, we apply polygenic, linkage disequilibrium-informed methods to the largest available case-control, genome-wide association study summary statistic data for melanoma and PD. We identify positive and significant genetic correlation (correlation: 0.17, 95% CI 0.10-0.24; P = 4.09 × 10-06) between melanoma and PD. We further demonstrate melanoma and PD-inferred gene expression to overlap across tissues (correlation: 0.14, 95% CI 0.06 to 0.22; P = 7.87 × 10-04) and highlight seven genes including PIEZO1, TRAPPC2L, and SOX6 as potential mediators of the genetic correlation between melanoma and PD. These findings demonstrate specific, shared genetic architecture between PD and melanoma that manifests at the level of gene expression.
- Subjects :
- Multifactorial Inheritance
Genetic correlation
Aging
Skin Neoplasms
Clinical Sciences
TWAS
Neurodegenerative
23andMe Research Team
Clinical Research
Genetics
Humans
2.1 Biological and endogenous factors
Aetiology
Melanoma
Cancer
Parkinson's Disease
Neurology & Neurosurgery
Prevention
Human Genome
Neurosciences
Parkinson Disease
Brain Disorders
Melanoma-Meta-analysis Consortium
Case-Control Studies
Neurological
Polygenic
Shared genetic architecture
Genome-Wide Association Study
Biotechnology
Subjects
Details
- Language :
- English
- ISSN :
- 00016322
- Database :
- OpenAIRE
- Journal :
- Acta neuropathologica, vol 139, iss 2
- Accession number :
- edsair.dedup.wf.001..42f067ada6e578c48a2d7be5555506c8