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Pathological Cluster Identification by Unsupervised Analysis in 3,822 UK Biobank Cardiac MRIs

Authors :
Zheng, Qiao
Delingette, Hervé
Fung, Kenneth
Petersen, Steffen
Ayache, Nicholas
E-Patient : Images, données & mOdèles pour la médeciNe numériquE (EPIONE)
Inria Sophia Antipolis - Méditerranée (CRISAM)
Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)
William Harvey Research Institute, Barts and the London Medical School
Barts Health NHS Trust [London, UK]
European Project: 291080,EC:FP7:ERC,ERC-2011-ADG_20110209,MEDYMA(2012)
Source :
Frontiers in Cardiovascular Medicine, Frontiers in Cardiovascular Medicine, 2020, 7, pp.164. ⟨10.3389/fcvm.2020.539788⟩, Frontiers in Cardiovascular Medicine, Frontiers Media, 2020, 7, pp.164. ⟨10.3389/fcvm.2020.539788⟩
Publication Year :
2020
Publisher :
HAL CCSD, 2020.

Abstract

International audience; We perform unsupervised analysis of image-derived shape and motion features extracted from 3,822 cardiac Magnetic resonance imaging (MRIs) of the UK Biobank. First, with a feature extraction method previously published based on deep learning models, we extract from each case 9 feature values characterizing both the cardiac shape and motion. Second, a feature selection is performed to remove highly correlated feature pairs. Third, clustering is carried out using a Gaussian mixture model on the selected features. After analysis, we identify 2 small clusters that probably correspond to 2 pathological categories. Further confirmation using a trained classification model and dimensionality reduction tools is carried out to support this finding. Moreover, we examine the differences between the other large clusters and compare our measures with the ground truth.

Details

Language :
English
ISSN :
2297055X
Database :
OpenAIRE
Journal :
Frontiers in Cardiovascular Medicine, Frontiers in Cardiovascular Medicine, 2020, 7, pp.164. ⟨10.3389/fcvm.2020.539788⟩, Frontiers in Cardiovascular Medicine, Frontiers Media, 2020, 7, pp.164. ⟨10.3389/fcvm.2020.539788⟩
Accession number :
edsair.dedup.wf.001..3a63bd65ea81db2012d060ec44f2ffcd