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Temperature effect in the inhibition of PLA2activity of Bothrops brazilivenom by Rosmarinic and Chlorogenic acids, experimental and computational approaches

Authors :
Diniz, Eduardo Augusto da Silva
da Silva, Diana Pontes
Ferreira, Sarah de Sousa
Fernandes-Pedrosa, Matheus de Freitas
Vieira, Davi Serradella
Source :
Journal of Biomolecular Structure and Dynamics; July 2024, Vol. 42 Issue: 10 p5238-5252, 15p
Publication Year :
2024

Abstract

AbstractMyotoxicity caused by snakebite envenoming emerges as one of the main problems of ophidic accidents as it is not well neutralized by the current serum therapy. A promising alternative is to search for efficient small molecule inhibitors that can act against multiple venom components. Phospholipase A2(PLA2) is frequently found in snake venom and is usually associated with myotoxicity. Thus it represents an excellent target for the search of new treatments. This work reports the effect of temperature in the inhibition of catalytic properties of PLA2from Bothrops brazilivenom by Rosmarinic (RSM) and Chlorogenic (CHL) acids through experimental and computational approaches. Three temperatures were evaluated (25, 37 and 50 °C). In the experimental section, enzymatic assays showed that RSM is a better inhibitor in all three temperatures. At 50 °C, the inhibition efficiency decayed significantly for both acids. Docking studies revealed that both ligands bind to the hydrophobic channel of the protein dimer where the phospholipid binds in the catalytic process, interacting with several functional residues. In this context, RSM presents better interaction energies due to stronger interactions with chain B of the dimer. Molecular dynamics simulations showed that RSM can establish selective interactions with ARG112B of PLA2, which is located next to residues of the putative Membrane Disruption Site in PLA2-like structures. The affinity of RSM and CHL acids towards PLA2is mainly driven by electrostatic interactions, especially salt bridge interactions established with residues ARG33B (for CHL) and ARG112B (RSM) and hydrogen bonds with residue ASP89A. The inability of CHL to establish a stable interaction with ARG112B was identified as the reason for its lower inhibition efficiency compared to RSM at the three temperatures. Furthermore, extensive structural analysis was performed to explain the lower inhibition efficiency at 50 °C for both ligands. The analysis performed in this work provides important information for the future design of new inhibitors.Communicated by Ramaswamy H. Sarma

Details

Language :
English
ISSN :
07391102 and 15380254
Volume :
42
Issue :
10
Database :
Supplemental Index
Journal :
Journal of Biomolecular Structure and Dynamics
Publication Type :
Periodical
Accession number :
ejs66410768
Full Text :
https://doi.org/10.1080/07391102.2023.2226912