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Characterizing prostate cancer risk through multi-ancestry genome-wide discovery of 187 novel risk variants
Authors :
Wang, Anqi Shen, Jiayi Rodriguez, Alex A. Saunders, Edward J. Chen, Fei Janivara, Rohini Darst, Burcu F. Sheng, Xin Xu, Yili Chou, Alisha J. Benlloch, Sara Dadaev, Tokhir Brook, Mark N. Plym, Anna Sahimi, Ali Hoffman, Thomas J. Takahashi, Atushi Matsuda, Koichi Momozawa, Yukihide Fujita, Masashi Laisk, Triin Figuerêdo, Jéssica Muir, Kenneth Ito, Shuji Liu, Xiaoxi Uchio, Yuji Kubo, Michiaki Kamatani, Yoichiro Lophatananon, Artitaya Wan, Peggy Andrews, Caroline Lori, Adriana Choudhury, Parichoy P. Schleutker, Johanna Tammela, Teuvo L. J. Sipeky, Csilla Auvinen, Anssi Giles, Graham G. Southey, Melissa C. MacInnis, Robert J. Cybulski, Cezary Wokolorczyk, Dominika Lubinski, Jan Rentsch, Christopher T. Cho, Kelly Mcmahon, Benjamin H. Neal, David E. Donovan, Jenny L. Hamdy, Freddie C. Martin, Richard M. Nordestgaard, Borge G. Nielsen, Sune F. Weischer, Maren Bojesen, Stig E. Røder, Andreas Stroomberg, Hein V. Batra, Jyotsna Chambers, Suzanne Horvath, Lisa Clements, Judith A. Tilly, Wayne Risbridger, Gail P. Gronberg, Henrik Aly, Markus Szulkin, Robert Eklund, Martin Nordstrom, Tobias Pashayan, Nora Dunning, Alison M. Ghoussaini, Maya Travis, Ruth C. Key, Tim J. Riboli, Elio Park, Jong Y. Sellers, Thomas A. Lin, Hui-Yi Albanes, Demetrius Weinstein, Stephanie Cook, Michael B. Mucci, Lorelei A. Giovannucci, Edward Lindstrom, Sara Kraft, Peter Hunter, David J. Penney, Kathryn L. Turman, Constance Tangen, Catherine M. Goodman, Phyllis J. Thompson, Ian M. Hamilton, Robert J. Fleshner, Neil E. Finelli, Antonio Parent, Marie-Élise Stanford, Janet L. Ostrander, Elaine A. Koutros, Stella Beane Freeman, Laura E. Stampfer, Meir Wolk, Alicja Håkansson, Niclas Andriole, Gerald L. Hoover, Robert N. Machiela, Mitchell J. Sørensen, Karina Dalsgaard Borre, Michael Blot, William J. Zheng, Wei Yeboah, Edward D. Mensah, James E. Lu, Yong-Jie Zhang, Hong-Wei Feng, Ninghan Mao, Xueying Wu, Yudong Zhao, Shan-Chao Sun, Zan Thibodeau, Stephen N. McDonnell, Shannon K. Schaid, Daniel J. West, Catharine M. L. Barnett, Gill Maier, Christiane Schnoeller, Thomas Luedeke, Manuel Kibel, Adam S. Drake, Bettina F. Cussenot, Olivier Cancel-Tassin, Geraldine Menegaux, Florence Truong, Thérèse Koudou, Yves Akoli John, Esther M. Grindedal, Eli Marie Maehle, Lovise Khaw, Kay-Tee Ingles, Sue A. Stern, Mariana C. Vega, Ana Gómez-Caamaño, Antonio Fachal, Laura Rosenstein, Barry S. Kerns, Sarah L. Ostrer, Harry Teixeira, Manuel R. Paulo, Paula Brandão, Andreia Watya, Stephen Lubwama, Alexander Bensen, Jeannette T. Butler, Ebonee N. Mohler, James L. Taylor, Jack A. Kogevinas, Manolis Dierssen-Sotos, Trinidad Castaño-Vinyals, Gemma Cannon-Albright, Lisa Teerlink, Craig C. Huff, Chad D. Pilie, Patrick Yu, Yao Bohlender, Ryan J. Gu, Jian Strom, Sara S. Multigner, Luc Blanchet, Pascal Brureau, Laurent Kaneva, Radka Slavov, Chavdar Mitev, Vanio Leach, Robin J. Brenner, Hermann Chen, Xuechen Holleczek, Bernd Schöttker, Ben Klein, Eric A. Hsing, Ann W. Kittles, Rick A. Murphy, Adam B. Logothetis, Christopher J. Kim, Jeri Neuhausen, Susan L. Steele, Linda Ding, Yuan Chun Isaacs, William B. Nemesure, Barbara Hennis, Anselm J. M. Carpten, John Pandha, Hardev Michael, Agnieszka De Ruyck, Kim De Meerleer, Gert Ost, Piet Xu, Jianfeng Razack, Azad Lim, Jasmine Teo, Soo-Hwang Newcomb, Lisa F. Lin, Daniel W. Fowke, Jay H. Neslund-Dudas, Christine M. Rybicki, Benjamin A. Gamulin, Marija Lessel, Davor Kulis, Tomislav Usmani, Nawaid Abraham, Aswin Singhal, Sandeep Parliament, Matthew Claessens, Frank Joniau, Steven Van den Broeck, Thomas Gago-Dominguez, Manuela Castelao, Jose Esteban Martinez, Maria Elena Larkin, Samantha Townsend, Paul A. Aukim-Hastie, Claire Bush, William S. Aldrich, Melinda C. Crawford, Dana C. Srivastava, Shiv Cullen, Jennifer Petrovics, Gyorgy Casey, Graham Wang, Ying Tettey, Yao Lachance, Joseph Tang, Wei Biritwum, Richard B. Adjei, Andrew A. Tay, Evelyn Truelove, Ann Niwa, Shelley Yamoah, Kosj Govindasami, Koveela Chokkalingam, Anand P. Keaton, Jacob M. Hellwege, Jacklyn N. Clark, Peter E. Jalloh, Mohamed Gueye, Serigne M. Niang, Lamine Ogunbiyi, Olufemi Shittu, Olayiwola Amodu, Olukemi Adebiyi, Akindele O. Aisuodionoe-Shadrach, Oseremen I. Ajibola, Hafees O. Jamda, Mustapha A. Oluwole, Olabode P. Nwegbu, Maxwell Adusei, Ben Mante, Sunny Darkwa-Abrahams, Afua Diop, Halimatou Gundell, Susan M. Roobol, Monique J. Jenster, Guido van Schaik, Ron H. N. Hu, Jennifer J. Sanderson, Maureen Kachuri, Linda Varma, Rohit McKean-Cowdin, Roberta Torres, Mina Preuss, Michael H. Loos, Ruth J. F. Zawistowski, Matthew Zöllner, Sebastian Lu, Zeyun Van Den Eeden, Stephen K. Easton, Douglas F. Ambs, Stefan Edwards, Todd L. Mägi, Reedik Rebbeck, Timothy R. Fritsche, Lars Chanock, Stephen J. Berndt, Sonja I. Wiklund, Fredrik Nakagawa, Hidewaki Witte, John S. Gaziano, J. Michael Justice, Amy C. Mancuso, Nick Terao, Chikashi Eeles, Rosalind A. Kote-Jarai, Zsofia Madduri, Ravi K. Conti, David V. Haiman, Christopher A.
Source :
Nature Genetics; December 2023, Vol. 55 Issue: 12 p2065-2074, 10p
Publication Year :
2023
Abstract
The transferability and clinical value of genetic risk scores (GRSs) across populations remain limited due to an imbalance in genetic studies across ancestrally diverse populations. Here we conducted a multi-ancestry genome-wide association study of 156,319 prostate cancer cases and 788,443 controls of European, African, Asian and Hispanic men, reflecting a 57% increase in the number of non-European cases over previous prostate cancer genome-wide association studies. We identified 187 novel risk variants for prostate cancer, increasing the total number of risk variants to 451. An externally replicated multi-ancestry GRS was associated with risk that ranged from 1.8 (per standard deviation) in African ancestry men to 2.2 in European ancestry men. The GRS was associated with a greater risk of aggressive versus non-aggressive disease in men of African ancestry (P= 0.03). Our study presents novel prostate cancer susceptibility loci and a GRS with effective risk stratification across ancestry groups.
Details
Language :
English
ISSN :
10614036 and 15461718
Volume :
55
Issue :
12
Database :
Supplemental Index
Journal :
Nature Genetics
Publication Type :
Periodical
Accession number :
ejs64470288
Full Text :
https://doi.org/10.1038/s41588-023-01534-4