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Denoising of pre-beamformed photoacoustic data using generative adversarial networks

Authors :
Refaee, Amir
Kelly, Corey J.
Moradi, Hamid
Salcudean, Septimiu E.
Source :
Biomedical Optics Express; October 2021, Vol. 12 Issue: 10 p6184-6204, 21p
Publication Year :
2021

Abstract

We have trained generative adversarial networks (GANs) to mimic both the effect of temporal averaging and of singular value decomposition (SVD) denoising. This effectively removes noise and acquisition artifacts and improves signal-to-noise ratio (SNR) in both the radio-frequency (RF) data and in the corresponding photoacoustic reconstructions. The method allows a single frame acquisition instead of averaging multiple frames, reducing scan time and total laser dose significantly. We have tested this method on experimental data, and quantified the improvement over using either SVD denoising or frame averaging individually for both the RF data and the reconstructed images. We achieve a mean squared error (MSE) of 0.05%, structural similarity index measure (SSIM) of 0.78, and a feature similarity index measure (FSIM) of 0.85 compared to our ground-truth RF results. In the subsequent reconstructions using the denoised data we achieve a MSE of 0.05%, SSIM of 0.80, and a FSIM of 0.80 compared to our ground-truth reconstructions.

Details

Language :
English
ISSN :
21567085
Volume :
12
Issue :
10
Database :
Supplemental Index
Journal :
Biomedical Optics Express
Publication Type :
Periodical
Accession number :
ejs57806876