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Synthesis and DNA binding properties of bioorganometallic (η5-pentamethylcyclopentadienyl)iridium(iii) complexes of the type [(η5-C<SUB>5</SUB>Me<SUB>5</SUB>)Ir(Aa)(dppz)]n+ (dppz = dipyrido[3,2-a:2',3'-c]phenazine, n = 13), with S-coordinated amino acids (Aa) or peptides
- Source :
- Journal of the Chemical Society, Dalton Transactions; March 11, 2002, Vol. 2002 Issue: 6 p966-974, 9p
- Publication Year :
- 2002
-
Abstract
- The DNA binding of cationic complexes of the type [(η<superscript>5</superscript>-C<SUB>5</SUB>Me<SUB>5</SUB>)Ir(Aa)(dppz)](CF<SUB>3</SUB>SO<SUB>3</SUB>)<SUB>n</SUB> (dppz = dipyrido[3,2-a:2',3'-c]phenazine; n = 1, Aa = AccysOH <compoundref>7</compoundref>; n = 2, Aa = AcmetOMe <compoundref>4</compoundref>, H<SUB>2</SUB>cysOMe <compoundref>8</compoundref>; n = 3, Aa = H<SUB>2</SUB>metOMe <compoundref>5</compoundref>) containing S-coordinated amino acids (HmetOH = methionine, HcysOH = cysteine) has been studied by UV-vis titration, 2D-NOESY and gel electrophoresis. The observed steady decrease in absorbance at maxima between 350 and 400 nm on UV-vis titration with CT DNA and the bathochromic shifts of these absorption maxima are consistent with stable intercalative DNA binding for these complexes. An increase in the binding constant K<SUB>b</SUB> from 8.80(6) × 10<superscript>4</superscript> for the monocation of <compoundref>7</compoundref> through 2.30(4) × 10<superscript>5</superscript> and 7.04(5) × 10<superscript>5</superscript> for the dications of <compoundref>8</compoundref> and <compoundref>4</compoundref> to 2.62(3) × 10<superscript>6</superscript> M<superscript>−1</superscript> for the 3+ cation of <compoundref>5</compoundref> clearly reflects the strengthening of the electrostatic interaction with the negatively charged phosphodiester backbone of DNA with increasing cation charge. Analogous values of 2.81(7) × 10<superscript>5</superscript> and 1.26(5) × 10<superscript>6</superscript> M<superscript>−1</superscript> were obtained for the (η<superscript>5</superscript>-C<SUB>5</SUB>Me<SUB>5</SUB>)Rh<superscript>III</superscript> complexes <compoundref>14</compoundref> (n = 2, Aa = H<SUB>2</SUB>cysOMe) and <compoundref>13</compoundref> (n = 3, Aa = H<SUB>2</SUB>metOMe). Binding site sizes for the organometallic Ir<superscript>III</superscript> and Rh<superscript>III</superscript> complexes on CT DNA lie in the range 1.52.1 base pairs. NOE cross peaks for the 1 ∶ 1 complex formed between <compoundref>5</compoundref> and d(GTCGAC)<SUB>2</SUB> are consistent with intercalation adjacent to T<SUB>2</SUB> from the major groove. Complexes <compoundref>4</compoundref>, <compoundref>5</compoundref> and [(η<superscript>5</superscript>-C<SUB>5</SUB>Me<SUB>5</SUB>)Ir(HglyglymetOH)(dppz)](CF<SUB>3</SUB>SO<SUB>3</SUB>)<SUB>2</SUB> <compoundref>6</compoundref> (HglyOH = glycine) cleave the supercoiled plasmid pBluescript II KS+, on irradiation for 30180 s with a high pressure Hg lamp, to afford nicked circular and linear DNA forms. X-Ray structural analyses are reported for [(η<superscript>5</superscript>-C<SUB>5</SUB>Me<SUB>5</SUB>)IrCl(dppz)](CF<SUB>3</SUB>SO<SUB>3</SUB>) <compoundref>3</compoundref> and [(η<superscript>5</superscript>-C<SUB>5</SUB>Me<SUB>5</SUB>)Ir(9-Etgua)(phen)] (CF<SUB>3</SUB>SO<SUB>3</SUB>)<SUB>2</SUB> <compoundref>16</compoundref> (9-Etgua = 9-ethylguanine).
Details
- Language :
- English
- ISSN :
- 03009246
- Volume :
- 2002
- Issue :
- 6
- Database :
- Supplemental Index
- Journal :
- Journal of the Chemical Society, Dalton Transactions
- Publication Type :
- Periodical
- Accession number :
- ejs2046835