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Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.
- Source :
- Systematic & Applied Microbiology; Jul2023, Vol. 46 Issue 4, pN.PAG-N.PAG, 1p
- Publication Year :
- 2023
-
Abstract
- • Two Pseudomonas species are described for isolates from Serbian fields. • Phylogenetic, genomic and phenotypic analyses confirmed they were new species. • Names P. serbica (IT-P366<superscript>T</superscript>) and P. serboccidentalis (IT-P374<superscript>T</superscript>) are proposed. • These two novel species possess a set of phytobeneficial genes. Pseudomonas strains IT-194P, IT-215P, IT-P366<superscript>T</superscript> and IT-P374<superscript>T</superscript> were isolated from the rhizospheres of wheat grown in soils sampled from different fields (some of them known to be disease-suppressive) located near Mionica, Serbia. Phylogenetic analysis of the 16S rRNA genes and of whole genome sequences showed that these strains belong to two potentially new species, one containing strains IT-P366<superscript>T</superscript> and IT-194P and clustering (whole genome analysis) next to P. umsongensis DSM16611<superscript>T</superscript>, and another species containing strains IT-P374<superscript>T</superscript> and IT-215P and clustering next to P. koreensis LMG21318<superscript>T</superscript>. Genome analysis confirmed the proposition of novel species, as ANI was below the threshold of 95% and dDDH below 70% for strains IT-P366<superscript>T</superscript> (compared with P. umsongensis DSM16611<superscript>T</superscript>) and IT-P374<superscript>T</superscript> (compared with P. koreensis LMG21318<superscript>T</superscript>). Unlike P. umsongensis DSM16611<superscript>T</superscript>, strains of P. serbica can grow on D-mannitol, but not on pectin, D-galacturonic acid, L-galactonic acid lactone and α-hydroxybutyric acid. In contrary to P. koreensis LMG21318<superscript>T</superscript>, strains of P. serboccidentalis can use sucrose, inosine and α-ketoglutaric acid (but not L-histidine) as carbon sources. Altogether, these results indicate the existence of two novel species for which we propose the names Pseudomonas serbica sp. nov., with the type strain IT-P366<superscript>T</superscript> (=CFBP 9060 <superscript>T</superscript> = LMG 32732 <superscript>T</superscript> = EML 1791 <superscript>T</superscript>) and Pseudomonas serboccidentalis sp. nov., with the type strain IT-P374<superscript>T</superscript> (=CFBP 9061 <superscript>T</superscript> = LMG 32734 <superscript>T</superscript> = EML 1792 <superscript>T</superscript>). Strains from this study presented a set of phytobeneficial functions modulating plant hormonal balance, plant nutrition and plant protection, suggesting a potential as Plant Growth-Promoting Rhizobacteria (PGPR). [ABSTRACT FROM AUTHOR]
Details
- Language :
- English
- ISSN :
- 07232020
- Volume :
- 46
- Issue :
- 4
- Database :
- Supplemental Index
- Journal :
- Systematic & Applied Microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 164853830
- Full Text :
- https://doi.org/10.1016/j.syapm.2023.126425