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Developing liver cancer drug response prediction system using late fusion of reduced deep features.

Authors :
Hassan, Mehdi
Ali, Safdar
Alquhayz, Hani
Kim, Jin Young
Sanaullah, Muhammad
Source :
Journal of King Saud University - Computer & Information Sciences; Nov2022:Part A, Vol. 34 Issue 10, p8122-8135, 14p
Publication Year :
2022

Abstract

Liver cancer is a major cause of death, with a high mortality rate worldwide. For better treatment and rehabilitation of liver cancer, assessing and evaluating drug delivery and response prediction is vital. In this study, we propose a novel approach for the prediction of the liver anticancer drug response using modified ResNet101 deep learning with transfer learning (TL) concept for deep features extraction. Dimension reduction algorithms, PCA and t -SNE are applied to capture global and local structures of deep features, respectively. Herein, a new fusion scheme is introduced that uses global and local levels of image information to improve the classification. Reduced deep fused features are used to develop a quadratic discriminant analysis (QDA) prediction model. The proposed approach is evaluated on fluorescent images of human hepatocellular carcinoma (HepG2) treated using an anticancer drug functionalized by cobalt ferrite@barium titanate (CFO@BTO) nanoparticles. A dataset comprising 203 HepG2 microscopic images is used to train and test the model using the split ratio of 75%:25% by employing a 5-fold cross-validation technique. The proposed system achieved a high accuracy of 98.0% compared to other state-of-the-art approaches. The developed pipeline is flexible and can be extended for prostate, lung, and breast cancers. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
13191578
Volume :
34
Issue :
10
Database :
Supplemental Index
Journal :
Journal of King Saud University - Computer & Information Sciences
Publication Type :
Academic Journal
Accession number :
160169906
Full Text :
https://doi.org/10.1016/j.jksuci.2022.07.024