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Use of Narrative Concepts in Electronic Health Records to Validate Associations Between Genetic Factors and Response to Treatment of Inflammatory Bowel Diseases.

Authors :
Ananthakrishnan, Ashwin N.
Cagan, Andrew
Cai, Tianxi
Gainer, Vivian S.
Savova, Guergana
Shaw, Stanley Y.
Churchill, Susanne
Burke, Kristin E.
Karlson, Elizabeth W.
Murphy, Shawn N.
Kohane, Isaac
Liao, Katherine P.
Xavier, Ramnik J.
Source :
Clinical Gastroenterology & Hepatology; Jul2020, Vol. 18 Issue 8, p1890-1892, 3p
Publication Year :
2020

Abstract

Crohn's disease (CD) and ulcerative colitis (UC) are heterogeneous. With availability of therapeutic classes with distinct immunologic mechanisms of action, it has become imperative to identify markers that predict likelihood of response to each drug class. However, robust development of such tools has been challenging because of need for large prospective cohorts with systematic and careful assessment of treatment response using validated indices. Most hospitals in the United States use electronic health records (EHRs) that warehouse a large amount of narrative (free-text) and codified (administrative) data generated during routine clinical care. These data have been used to construct virtual disease cohorts for epidemiologic research as well as for defining genetic basis of disease states or discrete laboratory values.<superscript>1–3</superscript> Whether EHR-based data can be used to validate genetic associations for more nuanced outcomes such as treatment response has not been examined previously. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15423565
Volume :
18
Issue :
8
Database :
Supplemental Index
Journal :
Clinical Gastroenterology & Hepatology
Publication Type :
Academic Journal
Accession number :
143856684
Full Text :
https://doi.org/10.1016/j.cgh.2019.08.005