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Position-restricted substring searching over small alphabets.

Authors :
Biswas, Sudip
Ku, Tsung-Han
Shah, Rahul
Thankachan, Sharma V.
Source :
Journal of Discrete Algorithms; Sep2017, Vol. 46-47, p36-39, 4p
Publication Year :
2017

Abstract

We consider the problem of indexing a given text T [ 0 . . . n − 1 ] of n characters over an alphabet set Σ of size σ , in order to answer the position-restricted substring searching queries. The query input consists of a pattern P (of length p ) and two indices ℓ and r and the output is the set of all o c c ℓ , r occurrences of P in T [ ℓ . . . r ] . In this paper, we propose an O ( n log ⁡ σ ) -word space index with O ( p + o c c ℓ , r log ⁡ log ⁡ n ) query time. Our solution is interesting when the alphabet size is small. For example, when the alphabet set is of constant size, we achieve significant improvement over the previously best-known linear space index by Navarro and Nekrich [SWAT 2012] with O ( p + o c c ℓ , r log ϵ ⁡ n ) query time, where ϵ > 0 is an arbitrarily small positive constant. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15708667
Volume :
46-47
Database :
Supplemental Index
Journal :
Journal of Discrete Algorithms
Publication Type :
Academic Journal
Accession number :
126064373
Full Text :
https://doi.org/10.1016/j.jda.2017.10.001