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Targeted NGS meets expert clinical characterization: Efficient diagnosis of spastic paraplegia type 11.

Authors :
Castro-Fernández, Cristina
Arias, Manuel
Blanco-Arias, Patricia
Santomé-Collazo, Luis
Amigo, Jorge
Carracedo, Ángel
Sobrido, Maria-Jesús
Source :
Applied & Translational Genomics; Jun2015, Vol. 5, p33-36, 4p
Publication Year :
2015

Abstract

Next generation sequencing (NGS) is transforming the diagnostic approach for neurological disorders, since it allows simultaneous analysis of hundreds of genes, even based on just a broad, syndromic patient categorization. However, such an approach bears a high risk of incidental and uncertain genetic findings. We report a patient with spastic paraplegia whose comprehensive neurological and imaging examination raised a high clinical suspicion of SPG11. Thus, although our NGS pipeline for this group of disorders includes gene panel and exome sequencing, in this sample only the spatacsin gene region was captured and subsequently searched for mutations. Two probably pathogenic variants were quickly and clearly identified, confirming the diagnosis of SPG11. This case illustrates how combination of expert clinical characterization with highly oriented NGS protocols leads to a fast, cost-efficient diagnosis, minimizing the risk of findings with unclear significance. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
22120661
Volume :
5
Database :
Supplemental Index
Journal :
Applied & Translational Genomics
Publication Type :
Academic Journal
Accession number :
109180298
Full Text :
https://doi.org/10.1016/j.atg.2015.05.005