Back to Search Start Over

Variation at HLA-DRB1 is associated with resistance to enteric fever.

Authors :
Dunstan, Sarah J
Phuong, Le Thi
Lanh, Mai Ngoc
Do, Tan
Hon, Do Nu
Aung, Tin
Teo, Yik Ying
Hibberd, Martin L
Okada, Yukinori
Raychaudhuri, Soumya
Simmons, Cameron P
Baker, Stephen
de Bakker, Paul I W
Hue, Nguyen Thi
Khor, Chiea Chuen
Han, Buhm
Li, Zheng
Sim, Kar Seng
Foo, Jia Nee
Tram, Trinh Thi Bich
Source :
Nature Genetics; Dec2014, Vol. 46 Issue 12, p1333-1336, 4p, 1 Chart, 1 Graph
Publication Year :
2014

Abstract

Enteric fever affects more than 25 million people annually and results from systemic infection with Salmonella enterica serovar Typhi or Paratyphi pathovars A, B or C<superscript>1</superscript>. We conducted a genome-wide association study of 432 individuals with blood culture-confirmed enteric fever and 2,011 controls from Vietnam. We observed strong association at rs7765379 (odds ratio (OR) for the minor allele = 0.18, P = 4.5 × 10<superscript>−10</superscript>), a marker mapping to the HLA class II region, in proximity to HLA-DQB1 and HLA-DRB1. We replicated this association in 595 enteric fever cases and 386 controls from Nepal and also in a second independent collection of 151 cases and 668 controls from Vietnam. Imputation-based fine-mapping across the extended MHC region showed that the classical HLA-DRB1*04:05 allele (OR = 0.14, P = 2.60 × 10<superscript>−11</superscript>) could entirely explain the association at rs7765379, thus implicating HLA-DRB1 as a major contributor to resistance against enteric fever, presumably through antigen presentation. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
10614036
Volume :
46
Issue :
12
Database :
Complementary Index
Journal :
Nature Genetics
Publication Type :
Academic Journal
Accession number :
99595722
Full Text :
https://doi.org/10.1038/ng.3143