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Genome-wide association study identifies multiple susceptibility loci for diffuse large B cell lymphoma.

Authors :
Cerhan, James R
Slager, Susan L
Nieters, Alexandra
Cox, David
Veron, Amelie S
Monnereau, Alain
Flowers, Christopher R
De Roos, Anneclaire J
Brooks-Wilson, Angela R
Severi, Gianluca
Melbye, Mads
Gu, Jian
Ye, Yuanqing
Wu, Xifeng
Jackson, Rebecca D
Berndt, Sonja I
Lan, Qing
Purdue, Mark P
Albanes, Demetrius
Hartge, Patricia
Source :
Nature Genetics; Nov2014, Vol. 46 Issue 11, p1233-1238, 6p
Publication Year :
2014

Abstract

Diffuse large B cell lymphoma (DLBCL) is the most common lymphoma subtype and is clinically aggressive. To identify genetic susceptibility loci for DLBCL, we conducted a meta-analysis of 3 new genome-wide association studies (GWAS) and 1 previous scan, totaling 3,857 cases and 7,666 controls of European ancestry, with additional genotyping of 9 promising SNPs in 1,359 cases and 4,557 controls. In our multi-stage analysis, five independent SNPs in four loci achieved genome-wide significance marked by rs116446171 at 6p25.3 (EXOC2; P = 2.33 × 10<superscript>−21</superscript>), rs2523607 at 6p21.33 (HLA-B; P = 2.40 × 10<superscript>−10</superscript>), rs79480871 at 2p23.3 (NCOA1; P = 4.23 × 10<superscript>−8</superscript>) and two independent SNPs, rs13255292 and rs4733601, at 8q24.21 (PVT1; P = 9.98 × 10<superscript>−13</superscript> and 3.63 × 10<superscript>−11</superscript>, respectively). These data provide substantial new evidence for genetic susceptibility to this B cell malignancy and point to pathways involved in immune recognition and immune function in the pathogenesis of DLBCL. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
10614036
Volume :
46
Issue :
11
Database :
Complementary Index
Journal :
Nature Genetics
Publication Type :
Academic Journal
Accession number :
99111165
Full Text :
https://doi.org/10.1038/ng.3105