Back to Search
Start Over
Geometry-based flexible and symmetric protein docking.
- Source :
- Proteins; Aug2005, Vol. 60 Issue 2, p224-231, 8p
- Publication Year :
- 2005
-
Abstract
- We present a set of geometric docking algorithms for rigid, flexible, and cyclic symmetry docking. The algorithms are highly efficient and have demonstrated very good performance in CAPRI Rounds 3-5. The flexible docking algorithm, FlexDock, is unique in its ability to handle any number of hinges in the flexible molecule, without degradation in run-time performance, as compared to rigid docking. The algorithm for reconstruction of cyclically symmetric complexes successfully assembles multimolecular complexes satisfying C<subscript> n</subscript> symmetry for any n in a matter of minutes on a desktop PC. Most of the algorithms presented here are available at the Tel Aviv University Structural Bioinformatics Web server (). Proteins 2005;60:224-231. © 2005 Wiley-Liss, Inc. [ABSTRACT FROM AUTHOR]
Details
- Language :
- English
- ISSN :
- 08873585
- Volume :
- 60
- Issue :
- 2
- Database :
- Complementary Index
- Journal :
- Proteins
- Publication Type :
- Academic Journal
- Accession number :
- 64227926
- Full Text :
- https://doi.org/10.1002/prot.20562