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Genome-wide association study identifies two new susceptibility loci for atopic dermatitis in the Chinese Han population.

Authors :
Liang-Dan Sun
Feng-Li Xiao
Yang Li
Wen-Ming Zhou
Hua-Yang Tang
Xian-Fa Tang
Hui Zhang
Schaarschmidt, Heidi
Xian-Bo Zuo
Foelster-Holst, Regina
Su-Min He
Mei Shi
Qiang Liu
Yong-Mei Lv
Xi-Lan Chen
Kun-Ju Zhu
Yi-Feng Guo
Da-Yan Hu
Ming Li
Min Li
Source :
Nature Genetics; Jul2011, Vol. 43 Issue 7, p690-694, 5p, 3 Charts, 2 Graphs
Publication Year :
2011

Abstract

Atopic dermatitis is a chronic, relapsing form of inflammatory skin disorder that is affected by genetic and environmental factors. We performed a genome-wide association study of atopic dermatitis in a Chinese Han population using 1,012 affected individuals (cases) and 1,362 controls followed by a replication study in an additional 3,624 cases and 12,197 controls of Chinese Han ethnicity, as well as 1,806 cases and 3,256 controls from Germany. We identified previously undescribed susceptibility loci at 5q22.1 (TMEM232 and SLC25A46, rs7701890, P<subscript>combined</subscript> = 3.15 × 10<superscript>?9</superscript>, odds ratio (OR) = 1.24) and 20q13.33 (TNFRSF6B and ZGPAT, rs6010620, P<subscript>combined</subscript> = 3.0 × 10<superscript>?8</superscript>, OR = 1.17) and replicated another previously reported locus at 1q21.3 (FLG, rs3126085, P<subscript>combined</subscript> = 5.90 × 10<superscript>?12</superscript>, OR = 0.82) in the Chinese sample. The 20q13.33 locus also showed evidence for association in the German sample (rs6010620, P = 2.87 × 10<superscript>?5</superscript>, OR = 1.25). Our study identifies new genetic susceptibility factors and suggests previously unidentified biological pathways in atopic dermatitis. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
10614036
Volume :
43
Issue :
7
Database :
Complementary Index
Journal :
Nature Genetics
Publication Type :
Academic Journal
Accession number :
61898358
Full Text :
https://doi.org/10.1038/ng.851