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RNA editing in P transposable element read-through transcripts in Drosophila melanogaster.

Authors :
Fukui, Tomokazu
Itoh, Masanobu
Source :
Genetica; Dec2010, Vol. 138 Issue 11/12, p1119-1126, 8p, 3 Diagrams, 1 Chart, 1 Graph
Publication Year :
2010

Abstract

RNA editing is proposed as a modulator of transcriptomes, but its biological impact has not been fully elucidated. In particular, its importance for transposable elements is controversial. We found RNA editing on antisense read-through transcripts of KP elements, one of the deletion derivatives of P transposable elements in Drosophila melanogaster. Three kinds of RNA editing were detected at 20 sites around the terminal inverted repeats (TIR); 15 A-to-G, four U-to-C, and one C-to-U conversions. A-to-G conversions are suggested to be attributed to A-to-I RNA editing on KP element RNAs, because inosine (I) in RNA is recognized as G by reverse transcriptase. TIRs were deduced to form dsRNAs as a putative target of ADAR. This is the first report of RNA editing on mobile elements of Drosophila. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00166707
Volume :
138
Issue :
11/12
Database :
Complementary Index
Journal :
Genetica
Publication Type :
Academic Journal
Accession number :
56524133
Full Text :
https://doi.org/10.1007/s10709-010-9499-z