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The Point Placement Problem on a Line - Improved Bounds for Pairwise Distance Queries.
- Source :
- Algorithms in Bioinformatics (9783540741251); 2007, p372-382, 11p
- Publication Year :
- 2007
-
Abstract
- In this paper, we study the adaptive version of the point placement problem on a line, which is motivated by a DNA mapping problem. To identify the relative positions of n distinct points on a straight line, we are allowed to ask queries of pairwise distances of the points in rounds. The problem is to find the number of queries required to determine a unique solution for the positions of the points up to translation and reflection. We improved the bounds for several cases. We show that $4n/3 + O(\sqrt{n})$ queries are sufficient for the case of two rounds while the best known result was 3n/2 queries. For unlimited number of rounds, the best result was 4n/3 queries. We obtain a much better result of using $5n/4 + O(\sqrt{n})$ queries with three rounds only. We also improved the lower bound of 30n/29 to 17n/16 for the case of two rounds. [ABSTRACT FROM AUTHOR]
Details
- Language :
- English
- ISBNs :
- 9783540741251
- Database :
- Complementary Index
- Journal :
- Algorithms in Bioinformatics (9783540741251)
- Publication Type :
- Book
- Accession number :
- 33290262
- Full Text :
- https://doi.org/10.1007/978-3-540-74126-8_35