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Non-parametric Statistical Tests for Informative Gene Selection.

Authors :
Wang, Jun
Liao, Xiaofeng
Yi, Zhang
Ma, Jinwen
Li, Fuhai
Liu, Jianfeng
Source :
Advances in Neural Networks - ISNN 2005; 2005, p697-702, 6p
Publication Year :
2005

Abstract

This paper presents two non-parametric statistical test methods, called Kolmogorov-Smirnov (KS) and U statistic test methods, respectively, for informative gene selection of a tumor from microarray data, with help of the theory of false discovery rate. To test the effectiveness of these non-parametric statistical test methods, we use the support vector machine (SVM) to construct a tumor diagnosis system (i.e., a binary classifier) based on the identified informative genes on the colon and leukemia data. It is shown by the experiments that the constructed tumor diagnosis system with both the KS and U statistic test methods can reach a good prediction accuracy on both the colon and leukemia data sets. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISBNs :
9783540259145
Database :
Complementary Index
Journal :
Advances in Neural Networks - ISNN 2005
Publication Type :
Book
Accession number :
32883937
Full Text :
https://doi.org/10.1007/11427469_111