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Multi-omics analysis of Prolyl 3-hydroxylase 1 as a prognostic biomarker for immune infiltration in ccRCC.

Authors :
Ding, Guixin
Wang, Tianqi
Sun, Fengze
Liu, Ming
Tang, Gonglin
Yu, Shengqiang
Chu, Yongli
Ma, Jian
Cui, Yuanshan
Wu, Gang
Wu, Jitao
Source :
NPJ Precision Oncology; 11/8/2024, Vol. 8 Issue 1, p1-16, 16p
Publication Year :
2024

Abstract

The formation of human collagen requires the presence of Prolyl 3-hydroxylase 1 (P3H1), but the regulatory mechanism of P3H1 remained insufficiently understood. Our study aimed to identify the role of P3H1 in clear cell renal cell carcinoma (ccRCC). P3H1 expression in ccRCC was validated using multiple databases and in vitro experiments. We performed a correlation analysis of P3H1 with drug sensitivity, immune checkpoints, and immune cell infiltration using transcriptome and single-cell sequencing. Drawing upon the Encyclopedia of RNA Interactomes database, we selected P3H1 as the focal point of our investigation, meticulously uncovering the intricate network of microRNAs and lncRNAs that potentially orchestrate ceRNA mechanisms. This study employs a multidimensional approach integrating vitro assays and multi-omics bioinformatics analyses to investigate P3H1's impact on ccRCC prognosis, immune modulation, immune checkpoints, ceRNA regulatory network, drug sensitivity, and therapeutic responses, aiming to uncover new insights into its therapeutic potential and inform future clinical strategies. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
2397768X
Volume :
8
Issue :
1
Database :
Complementary Index
Journal :
NPJ Precision Oncology
Publication Type :
Academic Journal
Accession number :
180805522
Full Text :
https://doi.org/10.1038/s41698-024-00748-x