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Machine learning optimized DriverDetect software for high precision prediction of deleterious mutations in human cancers.

Authors :
Koh, Herrick Yu Kan
Lam, Ulysses Tsz Fung
Ban, Kenneth Hon-Kim
Chen, Ee Sin
Source :
Scientific Reports; 9/30/2024, Vol. 14 Issue 1, p1-14, 14p
Publication Year :
2024

Abstract

The detection of cancer-driving mutations is important for understanding cancer pathology and therapeutics development. Prediction tools have been created to streamline the computation process. However, most tools available have heterogeneous sensitivity or specificity. We built a machine learning-derived algorithm, DriverDetect that combines the outputs of seven pre-existing tools to improve the prediction of candidate driver cancer mutations. The algorithm was trained with cancer gene-specific mutation datasets of cancer patients to identify cancer drivers. DriverDetect performed better than the individual tools or their combinations in the validation test. It has the potential to incorporate future novel prediction algorithms and can be retrained with new datasets, offering an expanded application to pan-cancer analysis for cross-cancer study. (115 words). [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20452322
Volume :
14
Issue :
1
Database :
Complementary Index
Journal :
Scientific Reports
Publication Type :
Academic Journal
Accession number :
180053364
Full Text :
https://doi.org/10.1038/s41598-024-71422-2