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Preliminary screening of biomarkers and drug candidates in a mouse model of β-thalassemia based on quasi-targeted metabolomics.
- Source :
- Frontiers in Physiology; 2024, p1-13, 13p
- Publication Year :
- 2024
-
Abstract
- Background: β-thalassemia (β-TH) is a hereditary hemolytic anemia that results in deficient hemoglobin (Hb) synthesis. It is characterized by ineffective erythropoiesis, anemia, splenomegaly, and systemic iron overload. Exploration new potential biomarkers and drug candidates is important to facilitate the prevention and treatment of β-TH. Methods: We applied quasi-targeted metabolomics between wild type (Wt) and heterozygous β-TH mice (Th3/+), a model of non-transfusion-dependent β-TH intermedia, in plasma and peripheral blood (PB) cells. Futher data was deeply mined by Kyoto Encyclopedia of Genomes (KEGG) and machine algorithms methods. Results: Using KEGG enrichment analysis, we found that taurine and hypotaurine metabolism disorders in plasma and alanine, aspartate and glutamate metabolism disorders in PB cells. After systematically anatomize the metabolites by machine algorithms, we confirmed that alpha-muricholic acid<superscript>UP</superscript> and N-acetyl-DL-phenylalanine<superscript>UP</superscript> in plasma and Dl-3-hydroxynorvaline<superscript>UP</superscript>, O-acetyl-L-serine<superscript>UP</superscript>, H-abu-OH<superscript>UP</superscript>, S-(Methyl) glutathione<superscript>UP</superscript>, sepiapterinDOWN, and imidazoleacetic acid<superscript>DOWN</superscript> in PB cells play key roles in predicting the occurrence of β-TH. Furthermore, Sepiapterin, Imidazoleacetic acid, Methyl alpha-Dglucopyranoside and alpha-ketoglutaric acid have a good binding capacity to hemoglobin E through molecular docking and are considered to be potential drug candidates for β-TH. Conclusion: Those results may help in identify useful molecular targets in the diagnosis and treatment of β-TH and lays a strong foundation for further research. [ABSTRACT FROM AUTHOR]
- Subjects :
- MACHINE learning
IRON overload
BLOOD plasma
METABOLIC disorders
HEMOLYTIC anemia
Subjects
Details
- Language :
- English
- ISSN :
- 1664042X
- Database :
- Complementary Index
- Journal :
- Frontiers in Physiology
- Publication Type :
- Academic Journal
- Accession number :
- 179521258
- Full Text :
- https://doi.org/10.3389/fphys.2024.1452558