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Identification of cell surface markers for acute myeloid leukemia prognosis based on multi-model analysis.

Authors :
Jiaqi Tang
Lin Luo
Bakwatanisa Bosco
Ning Li
Bin Huang
Rongrong Wu
Zihan Lin
Ming Hong
Wenjie Liu
Lingxiang Wu
Wei Wu
Mengyan Zhu
Quanzhong Liu
Peng Xia
Miao Yu
Diru Yao
Sali Lv
Ruohan Zhang
Wentao Liu
Qianghu Wang
Source :
Journal of Biomedical Research; Jul2024, Vol. 38 Issue 4, p397-412, 16p
Publication Year :
2024

Abstract

Given the extremely high inter-patient heterogeneity of acute myeloid leukemia (AML), the identification of biomarkers for prognostic assessment and therapeutic guidance is critical. Cell surface markers (CSMs) have been shown to play an important role in AML leukemogenesis and progression. In the current study, we evaluated the prognostic potential of all human CSMs in 130 AML patients from The Cancer Genome Atlas (TCGA) based on differential gene expression analysis and univariable Cox proportional hazards regression analysis. By using multi-model analysis, including Adaptive LASSO regression, LASSO regression, and Elastic Net, we constructed a 9-CSMs prognostic model for risk stratification of the AML patients. The predictive value of the 9-CSMs risk score was further validated at the transcriptome and proteome levels. Multivariable Cox regression analysis showed that the risk score was an independent prognostic factor for the AML patients. The AML patients with high 9-CSMs risk scores had a shorter overall and event-free survival time than those with low scores. Notably, single-cell RNA-sequencing analysis indicated that patients with high 9-CSMs risk scores exhibited chemotherapy resistance. Furthermore, PI3K inhibitors were identified as potential treatments for these high-risk patients. In conclusion, we constructed a 9-CSMs prognostic model that served as an independent prognostic factor for the survival of AML patients and held the potential for guiding drug therapy. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
16748301
Volume :
38
Issue :
4
Database :
Complementary Index
Journal :
Journal of Biomedical Research
Publication Type :
Academic Journal
Accession number :
178704129
Full Text :
https://doi.org/10.7555/JBR.38.20240065