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The miniature genome of broad mite, Polyphagotarsonemus latus (Tarsonemidae: Acari).

Authors :
Mohan, Muthugounder
Augustine, Neenu
Selvamani, Selva Babu
P. J., Aneesha
Selvapandian, Upasna
Pathak, Jyoti
Gracy R., Gandhi
Thiruvengadam, Venkatesan
S. N., Sushil
Source :
Scientific Data; 7/9/2024, Vol. 11 Issue 1, p1-7, 7p
Publication Year :
2024

Abstract

The broad mite, Polyphagotarsonemus latus (Tarsonemidae: Acari) is a highly polyphagous species that damage plant species spread across 57 different families. This pest has developed high levels of resistance to some commonly used acaricides. In the present investigation, we deciphered the genome information of P. latus by PacBio HiFi sequencing. P. latus is the third smallest arthropod genome sequenced so far with a size of 49.1 Mb. The entire genome was assembled into two contigs. A set of 9,286 protein-coding genes were annotated. Its compact genome size could be credited with multiple features such as very low repeat content (5.1%) due to the lack of proliferation of transposable elements, high gene density (189.1/Mb), more intronless genes (20.3%) and low microsatellite density (0.63%). [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20524463
Volume :
11
Issue :
1
Database :
Complementary Index
Journal :
Scientific Data
Publication Type :
Academic Journal
Accession number :
178354586
Full Text :
https://doi.org/10.1038/s41597-024-03579-4