Back to Search
Start Over
The miniature genome of broad mite, Polyphagotarsonemus latus (Tarsonemidae: Acari).
- Source :
- Scientific Data; 7/9/2024, Vol. 11 Issue 1, p1-7, 7p
- Publication Year :
- 2024
-
Abstract
- The broad mite, Polyphagotarsonemus latus (Tarsonemidae: Acari) is a highly polyphagous species that damage plant species spread across 57 different families. This pest has developed high levels of resistance to some commonly used acaricides. In the present investigation, we deciphered the genome information of P. latus by PacBio HiFi sequencing. P. latus is the third smallest arthropod genome sequenced so far with a size of 49.1 Mb. The entire genome was assembled into two contigs. A set of 9,286 protein-coding genes were annotated. Its compact genome size could be credited with multiple features such as very low repeat content (5.1%) due to the lack of proliferation of transposable elements, high gene density (189.1/Mb), more intronless genes (20.3%) and low microsatellite density (0.63%). [ABSTRACT FROM AUTHOR]
- Subjects :
- GENOME size
MITES
ACARICIDES
PLANT species
MICROSATELLITE repeats
ARTHROPODA
GENOMES
Subjects
Details
- Language :
- English
- ISSN :
- 20524463
- Volume :
- 11
- Issue :
- 1
- Database :
- Complementary Index
- Journal :
- Scientific Data
- Publication Type :
- Academic Journal
- Accession number :
- 178354586
- Full Text :
- https://doi.org/10.1038/s41597-024-03579-4