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TECPR2‐related hereditary sensory and autonomic neuropathy in two siblings from Palestine.

Authors :
Khalaf‐Nazzal, Reham
Dweikat, Imad
Ubeyratna, Nishanka
Fasham, James
Alawneh, Maysa
Leslie, Joseph
Maree, Mosab
Gunning, Adam
Zayed, Deyala Z.
Voutsina, Nikol
McGavin, Lucy
Sawafta, Reem
Owens, Martina
Baker, Wisam
Turnpenny, Peter
Al‐Hijawi, Fida'
Baple, Emma L.
Crosby, Andrew H.
Rawlins, Lettie E.
Source :
American Journal of Medical Genetics. Part A; Jul2024, Vol. 194 Issue 7, p1-7, 7p
Publication Year :
2024

Abstract

Due to the majority of currently available genome data deriving from individuals of European ancestry, the clinical interpretation of genomic variants in individuals from diverse ethnic backgrounds remains a major diagnostic challenge. Here, we investigated the genetic cause of a complex neurodevelopmental phenotype in two Palestinian siblings. Whole exome sequencing identified a homozygous missense TECPR2 variant (Chr14(GRCh38):g.102425085G>A; NM_014844.5:c.745G>A, p.(Gly249Arg)) absent in gnomAD, segregating appropriately with the inheritance pattern in the family. Variant assessment with in silico pathogenicity prediction and protein modeling tools alongside population database frequencies led to classification as a variant of uncertain significance. As pathogenic TECPR2 variants are associated with hereditary sensory and autonomic neuropathy with intellectual disability, we reviewed previously published candidate TECPR2 missense variants to clarify clinical outcomes and variant classification using current approved guidelines, classifying a number of published variants as of uncertain significance. This work highlights genomic healthcare inequalities and the challenges in interpreting rare genetic variants in populations underrepresented in genomic databases. It also improves understanding of the clinical and genetic spectrum of TECPR2‐related neuropathy and contributes to addressing genomic data disparity and inequalities of the genomic architecture in Palestinian populations. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15524825
Volume :
194
Issue :
7
Database :
Complementary Index
Journal :
American Journal of Medical Genetics. Part A
Publication Type :
Academic Journal
Accession number :
177740910
Full Text :
https://doi.org/10.1002/ajmg.a.63579